A complete list of my publications is available at Google Scholar and ORCID. Below are a few favourites:

E. Parey, A. Louis, J. Montfort, O. Bouchez, C. Roques, C. Iampietro, J. Lluch, A. Castinel, C. Donnadieu, T. Desvignes, C. Floi Bucao, E. Jouanno, M. Wen, S. Mejri, R. Dirks, H. Jansen, C. Henkel, W.-J. Chen, M. Zahm, C. Cabau, C. Klopp, A. Thompson, M. Robinson-Rechavi, I. Braasch, G. Lecointre, J. Bobe, J.H. Postlethwait, C. Berthelot, H. Roest Crollius & Y. Guiguen (2023) Genome structures resolve the early diversification of teleost fishes. Science 379, 572–575

K. Siddique, E. Ager-Wick, R. Fontaine, F.-A. Weltzien & C.V. Henkel (2021) Characterization of hormone-producing cell types in the teleost pituitary gland using single-cell RNA-seq. Sci. Data 8, 279

H.J. Jansen, M. Liem, S.A. Jong-Raadsen, S. Dufour, F.-A. Weltzien, W. Swinkels, A. Koelewijn, A.P. Palstra, B. Pelster, H.P. Spaink, G.E. van den Thillart, R.P. Dirks & C.V. Henkel (2017) Rapid de novo assembly of the European eel genome from nanopore sequencing reads. Sci. Rep. 7, 7213

F.J. Vonk, N.R. Casewell, C.V. Henkel, A. Heimberg, H.J. Jansen, R.J.R. McCleary, H.M.E. Kerkkamp, R. Vos, E. McGlinn, I. Guerreiro, J.J. Calvete, W. Wüster, A.E. Woods, J.M. Logan, R.A. Harrison, T.A. Castoe, A.P.J. de Koning, D.D. Pollock, M. Yandell, D. Calderon, C. Renjifo, R.B. Currier, D. Salgado, D. Pla, L. Sanz, A.S. Hyder, J.M.C. Ribeiro, P.W. Arntzen, G.E.E.J.M. van den Thillart, M. Boetzer, W. Pirovano, R.P. Dirks, H.P. Spaink, D. Duboule, E. McGlinn, R.M. Kini & M.K. Richardson (2013) The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system. Proc. Natl. Acad. Sci. USA 110, 20651–20656

T.A. Castoe, A.P.J. de Koning, K.T. Hall, D.C. Card, D.R. Schield, M.K. Fujita, R.P. Ruggiero, J.F. Degner, J.M. Daza, W. Gu, J. Reyes-Velasco, K.J. Shaney, J.M. Castoe, S.E. Fox, A.W. Poole, D. Polanco, J. Dobry, M.W. Vandewege, Q. Li, R.K. Schott, A. Kapusta, P. Minx, C. Feschotte, P. Uetz, D.A. Ray, F.G. Hoffmann, R. Bogden, E.N. Smith, B.S.W. Chang, F.J. Vonk, N.R. Casewell, C.V. Henkel, M.K. Richardson, S.P. Mackessy, A.M. Bronikowski, M. Yandell, W.C. Warren, S.M. Secor, D.D. Pollock (2013) The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proc. Natl. Acad. Sci. USA 110, 20645–20650

C.V. Henkel, E. Burgerhout, D.L. de Wijze, R.P. Dirks, Y. Minegishi, H.J. Jansen, H.P. Spaink, S. Dufour, F.-A. Weltzien, K. Tsukamoto & G.E.E.J.M. van den Thillart (2012) Primitive duplicate Hox clusters in the European eel’s genome. PLoS ONE 7, e32231

M. Boetzer, C.V. Henkel, H.J. Jansen, D. Butler & W. Pirovano (2011) Scaffolding pre-assembled contigs using SSPACE. Bioinformatics 27, 578–579